From: Horizontal gene transfer is not a hallmark of the human genome
Gene ID | Gene name | Results from Crisp et al. [1] study | Results from this study | ||||||
---|---|---|---|---|---|---|---|---|---|
HGT index | Source HGT taxon | Best non-chordate metazoan match | Bit score | Best non-chordate metazoan match | Matching protein ID | Bit score | New HGT index | ||
ENSG00000070269 | C14orf101 | 337 | Protist | B4LPG6 | 37 | Lingula anatina | XP_013409033 | 566 | –192 |
ENSG00000102805 | Ceroid-lipofuscinosis, neuronal 5 | 84 | Protist | E3MZU2 | 39 | Lottia gigantea | XP_009059770 | 338 | –215 |
ENSG00000116721 | PRAME family member 1 | 72 | Protista | A8MVS2 | 44 | No hits | |||
ENSG00000157358 | PRAME family member 15 | 45 | Protista | F1SUY5 | 89 | No hits | |||
ENSG00000232423 | PRAME family member 6 | 45 | Protista | F1SUY5 | 92 | No hits | |||
ENSG00000117115, ENSG00000142619, ENSG00000142623, ENSG00000159339 | Protein-arginine deiminase, types 2,3,1,5 | 464 | Bacteria | B4JS81 | 45 | Priapulus caudatus | XP_014670176 | 560 | –51 |
ENSG00000125458 | 5′,3′-nucleotidase, cytosolic | 135 | Bacteria | E3LP71 | 39 | Saccoglossus kowalevskii | XP_006825056 | 222 | –48 |
ENSG00000205309 | 5′,3′-nucleotidase, mitochondrial | 108 | Bacteria | B5DJB4 | 41 | L. anatina | XP_013404549 | 237 | –88 |
ENSG00000133561, ENSG00000133574, ENSG00000179144, ENSG00000196329, ENSG00000213203 | GTPase, IMAP family members 6, 4, 7, 5, and 1 | 51 | Plant | F1QNI4 | 94 | Crassostrea gigas | XP_011437597 | 208 | –63 |
ENSG00000136153 | LIM domain 7 | 47 | Protist | H9JLZ2 | 86 | S. kowalevskii | XP_006813620 | 268 | –135 |
ENSG00000136830 | Family with sequence similarity 129, member B | 74 | Protist | G6DB46 | 44 | Acropora digitifera | XP_015774462 | 115 | 3 |
ENSG00000140718 | Fat mass and obesity associated | 97 | Plant | C9J4C3 | 92 | S. kowalevskii | ALR88588 | 342 | –153 |
ENSG00000148288 | Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 | 91 | Bacteria | A8QE87 | 39 | Cimex lectularis | XP_014240367.1 | 37 | 93 |
ENSG00000154122 | Ankylosis, progressive homolog (mouse) | 129 | Protist | F5GXN7 | 90 | S. kowalevskii | 388 | –169 | |
ENSG00000172757 | Cofilin 1 | 31 | Fungi | B3S0K8 | 80 | Helobdella robusta | XP_009011217 | 108 | 3 |
ENSG00000175573 | Chromosome 11 open reading frame 68 | 60 | Fungi | D6WQ69 | 48 | S. kowalevskii | XP_002740403.1 | 157 | –49 |
ENSG00000177181 | Ribosomal modification protein rimK-like family member A | 74 | Archaea | E1GHX3 | 52 | Aplysia californica | XP_012936156 | 124 | 2 |
ENSG00000212907 | Mitochondrially encoded NADH dehydrogenase 4 L | 69 | Protist | P15554 | 68 | Xenoturbella bocki | YP_850984 | 67 | 71 |
ENSG00000216937 | Coiled-coil domain containing protein 7 | 48 | Protist | A7SDV0 | 64 | No hits | |||
ENSG00000242265 | Retrotransposon-derived protein PEG10 | 52 | Fungi | G0MWG3 | 49 | No hits | |||
ENSG00000256062 | ABO blood group (Histo-blood group ABO system transferase) | 84 | Bacteria | H3INK7 | 37 | S. kowalevskii | XM_006825840 | 218 | –97 |