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Table 1 Characteristics of chromoanagenesis classes

From: Defining the diverse spectrum of inversions, complex structural variation, and chromothripsis in the morbid human genome

 

Chromothripsis

Chromoanasynthesis

Chromoplexy

Mutational event

Single

Single or multiple

Single or multiple

Chromosomes

Few (1–4)

Few (usually 1)

Many (usually ≥ 4)

Breakpoints

Many (≥5; sometimes > 25)

Fewer (usually 5–25)

Fewer (usually 5–25)

Breakpoint distribution

Clustered

Clustered

Interspersed (usually in active chromatin)

Breakpoint signature

Blunt ends

Microhomology

Blunt ends

Dosage alteration

Cancer: often unbalanced (deletion bridges); Germline: mainly balanced (<5% of total rearrangement)

Unbalanced (predominantly copy gain)

Mainly balanced (occasional deletion bridges)

Proposed mechanism

Micronucleus missegregation + chromosome pulverization + NHEJ

Micronucleus missegregation + chromosome pulverization + MMBIR/FoSTeS

Multiple DSBs during active transcription + NHEJ

Proposed parent-of-origin bias

Paternal

None

None

Proposed transmission bias

Maternal

None

None

Germline reports

43

10

6

Case:Control

39:4

10:0

6:0

References

[9, 10, 17, 18, 23, 7678]

[1921]

[9, 22, 23]