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Table 1 Comparison of genome features of 34 ascomycete genomes

From: Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus

Species Strain Class Order Section Genome size (Mb) GC % Contigs (n) Reference
Aspergillus niger ATCC1015 Eurotiomycetes Eurotiales Nigri 35 50.3 24 [7]
Aspergillus niger CBS513.88 Eurotiomycetes Eurotiales Nigri 34 50.5 470 [10]
Aspergillus luchuensis CBS106.47 Eurotiomycetes Eurotiales Nigri 37 49.1 318 This study
Aspergillus tubingensis CBS134.48 Eurotiomycetes Eurotiales Nigri 35 49.2 87 This study
Aspergillus brasiliensis CBS101740 Eurotiomycetes Eurotiales Nigri 36 50.5 290 This study
Aspergillus carbonarius CBS141172 Eurotiomycetes Eurotiales Nigri 36 51.7 1346 This study
Aspergillus aculeatus CBS172.66 Eurotiomycetes Eurotiales Nigri 35 50.9 851 This study
Aspergillus versicolor CBS795.97 Eurotiomycetes Eurotiales Nidulantes 33 50.1 58 This study
Aspergillus sydowii CBS593.65 Eurotiomycetes Eurotiales Nidulantes 34 50.0 133 This study
Aspergillus nidulans FGSC A4 Eurotiomycetes Eurotiales Nidulantes 30 50.4 82 [4]
Aspergillus flavus NRRL3557 Eurotiomycetes Eurotiales Flavi 37 48.4 765 [9]
Aspergillus oryzae RIB40 Eurotiomycetes Eurotiales Flavi 38 48.3 28 [5]
Aspergillus terreus NIH2624 Eurotiomycetes Eurotiales Terrei 29 52.9 267 [14]
Aspergillus fumigatus Af293 Eurotiomycetes Eurotiales Fumigati 29 49.8 19 [6]
Aspergillus fischeri NRRL181 Eurotiomycetes Eurotiales Fumigati 33 49.4 976 [8]
Aspergillus clavatus NRRL1 Eurotiomycetes Eurotiales Clavati 28 49.2 143 [8]
Aspergillus glaucus CBS516.65 Eurotiomycetes Eurotiales Aspergillus 30 49.4 433 This study
Aspergillus wentii CBS141173 Eurotiomycetes Eurotiales Cremei 31 48.0 118 This study
Penicillium chrysogenum unknown Eurotiomycetes Eurotiales Chrysogena 31 48.8 299 This study
Penicillium rubens Wisconsin 54-1255 Eurotiomycetes Eurotiales Chrysogena 32 49.0 242 [18]
Penicillium digitatum PHI26 Eurotiomycetes Eurotiales Penicillium 26 48.9 304 [19]
Aspergillus zonatus CBS506.65 Eurotiomycetes Eurotiales Unclassified 29 48.3 460 This study
Talaromyces marneffei ATCC18224 Eurotiomycetes Eurotiales Talaromyces 29 46.7 524 Unpublished
Talaromyces stipitatus ATCC10500 Eurotiomycetes Eurotiales Talaromyces 36 46.1 896 Unpublished
Coccidioides immitis RS Eurotiomycetes Onygenales   29 46.0 10 [20]
Coccidioides posadasii C735 delta SOWgp Eurotiomycetes Onygenales   27 46.6 55 [20]
Uncinocarpus reesii 1704 Eurotiomycetes Onygenales   22 48.7 582 [20]
Microsporum canis CBS113480 Eurotiomycetes Onygenales   23 47.5 309 [21]
Trichophyton rubrum CBS118892 Eurotiomycetes Onygenales   23 48.3 622 [21]
Histoplasma capsulatum NAm1 Eurotiomycetes Onygenales   33 46.2 2867 [20]
Paracoccidioides brasiliensis Pb03 Eurotiomycetes Onygenales   29 44.5 552 [22]
Trichoderma reesei QM6a Sordariomycetes Hypocreales   33 52.8 131 [23]
Neurospora crassa OR74A Sordariomycetes Sordariales   41 48.3 411 [24]
Saccharomyces cerevisiae S288C Saccharomycetes Saccharomycetales   12 38.3 16 [25]
  1. The novel genomes generated in this study are in bold. The order of species follows the taxonomic organization (Fig. 1a)