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Table 1 Genome assembly and annotation summary

From: Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species

  M. persicae A. pisum
Statistic Clone O Clone G006 Release 2.1b
Genome
 No. sequences (> = 1 kb) 13,407 4018 12,969
 Largest scaffold 1,018,155 2,199,663 3,073,041
 Total length 354,698,803 347,304,760 541,675,471
 Total length (> = 1 kb) 354,698,803 347,300,841 532,843,107
 Scaffold N50 164,460 435,781 570,863
 Contig N50 59,051 71,400 28,209
 GC% 30.19 30.03 29.69
 # Ns 11,562,637 1,836,185 36,934,320
 Median kmer coverage 44× 51× NA
 CEGMA (% complete/partial) 94.76/98.39 94.35/98.39 93.15/97.98
Annotation
 Gene count (Coding) 18,433 18,529 36,939
 Total transcripts 30,247 30,127 36,939
 Transcripts per gene 1.64 1.63 1.00
 Transcript mean size complementary DNA (bp) 2119.36 2163.47 1964.11