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Table 2 Number of differentially expressed genes selected under different FDR corrections for different diseases

From: Integrative analysis of genetic data sets reveals a shared innate immune component in autism spectrum disorder and its co-morbidities

 

Bonferroni

BY

BH

None a

ASD

157

1258

5104

9176

Asthma

238

852

2501

5555

Bacterial and viral infection

1613

3630

6016

8183

Chronic kidney disease

66

416

3771

12577

Cerebral palsy

93

220

646

2352

Dilated cardiomyopathy

146

349

908

3455

Ear infection/otitis media

1629

3867

6708

6708

Epilepsy

5

4

12

2242

Inflammatory bowel disease

831

2547

4771

6897

Muscular dystrophy

207

517

1303

3885

Schizophrenia

54

149

508

2881

Upper respiratory infection

32

59

172

2664

  1. Significance cutoff of p<0.05
  2. ASD autism spectrum disorder, BY Benjamini–Yekutieli, BH Benjamini–Hochberg, FDR false discovery rate
  3. aNo FDR correction