Table 1 Types of samples curated
Sample type | Gene expression platform | Sample identifiers |
|---|---|---|
Microenvironment cell populations | Affymetrix Human Genome 133 Plus 2.0 | Additional file 1: Table S1 GEO accession number GSE86362 |
Microenvironment cell populations | Affymetrix Human Genome 133A | Additional file 1: Table S4 GEO accession number GSE86363 |
Microenvironment cell populations | Affymetrix HuGene 1.0 ST | Additional file 1: Table S5 GEO accession number GSE86357 |
In vitro RNA mixtures | Affymetrix Human Genome 133 Plus 2.0 | Additional file 1: Table S11 GEO accession number GSE64385 |
Non-diseased human tissues | Affymetrix Human Genome 133 Plus 2.0 | Additional file 1: Table S14 GEO accession number GSE7307 |
Non-hematopoietic tumors | Affymetrix Human Genome 133 Plus 2.0 | Additional file 1: Table S7 |
Non-hematopoietic tumors | Affymetrix Human Genome 133A | Additional file 1: Table S8 |
Non-hematopoietic tumors | Illumina HiSeq 2000 | Additional file 1: Table S9 |
Non-hematopoietic tumors | Other gene expression platforms | Additional file 1: Table S11 |