Table 2 Medfly genome NCBI annotation features for the assembly Ccap_1.0 (see http://www.ncbi.nlm.nih.gov/genome/annotation_euk/Ceratitis_capitata/101/ for details and additional features)
Feature | Count | Mean length (bp) |
|---|---|---|
Genes and pseudogenes | 14,652 | _ |
Protein-coding | 14,162 | _ |
Non-coding | 385 | _ |
Pseudogenes | 105 | _ |
Genes with variants | 3527 | _ |
Genes | 14,547 | 16,014 |
All transcripts | 24,125 | 2903 |
Messenger RNA | 23,075 | 2979 |
Miscellaneous RNA | 238 | 3506 |
Transfer RNA | 416 | 74 |
Long non-coding RNA | 396 | 1074 |
Single-exon transcripts | 2833 | 1193 |
CDSs | 23,075 | 2198 |
Exons | 77,742 | 465 |
Introns | 62,132 | 4117 |