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Fig. 4 | Genome Biology

Fig. 4

From: Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity

Fig. 4

Chromatin communities in the largest connected component (LCC) of the PCHi-C network. a Chromatin communities are defined based on the connectivity using ModuLand, which outputs overlapping communities [47]. The bridgeness of a node indicates the number of communities it belongs to. b ChAs in LCC versus enrichment in the top 500 bridgeness nodes for all features. PcG and RNAPII features are shown with bigger circles. c Hierarchical clustering of the empirical p value of the enrichment for the top ChAs features (ChAs > 0.1) along the chromatin communities

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