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Table 2 Associations between log TG, LDL-C, and HDL-C levels and DNA methylation

From: Blood lipids influence DNA methylation in circulating cells

  

Chromosome

Position

Mean DNAm (%)

Estimate (%/SD)a

P FDR

TG

cg14476101

1

120,255,993

63

−0.8 (−1.0, −0.6)

2.6 × 10−8

 

cg19693031

1

145,441,553

73

−0.6 (−0.8, −0.5)

5.2 × 10−9

 

cg06690548

4

139,162,809

85

−0.6 (−0.7, −0.5)

5.7 × 10−12

 

cg05575921

5

373,379

79

−0.9 (−1.3, −0.6)

4.3 × 10−3

 

cg14817490

5

392,921

32

−0.5 (−0.6, −0.3)

3.3 × 10−2

 

cg06560379

6

44,231,306

12

−0.2 (−0.2, −0.1)

4.0 × 10−2

 

cg19589396

8

103,937,375

69

−0.4 (−0.5, −0.2)

7.6 × 10−3

 

cg07504977

10

102,131,013

41

0.5 (0.3, 0.6)

2.4 × 10−4

 

cg11376147

11

57,261,199

21

−0.2 (−0.3, −0.1)

7.3 × 10−3

 

cg00574958

11

68,607,623

12

−0.4 (−0.5, −0.3)

2.4 × 10−23

 

cg17058475

11

68,607,738

14

−0.4 (−0.5, −0.3)

7.9 × 10−7

 

cg12556569

11

116,664,040

26

2.4 (1.5, 3.4)

1.4 × 10−2

 

cg15863539

17

17,716,951

79

0.2 (0.1, 0.3)

1.3 × 10−3

 

cg20544516

17

17,717,184

73

0.3 (0.2, 0.4)

1.1 × 10−3

 

cg11024682

17

17,730,095

46

0.5 (0.3, 0.6)

3.8 × 10−11

 

cg08857797

17

40,927,700

57

0.4 (0.3, 0.6)

7.3 × 10−3

 

cg03636183

19

17,000,586

68

−0.6 (−0.8, −0.3)

1.3 × 10−2

 

cg02711608

19

47,287,965

24

−0.3 (−0.4, −0.2)

3.9 × 10−2

 

cg27243685

21

43,642,367

83

0.4 (0.4, 0.5)

8.4 × 10−20

 

cg01881899

21

43,652,705

13

0.3 (0.2, 0.3)

1.7 × 10−4

 

cg06500161

21

43,656,588

60

0.7 (0.6, 0.8)

1.5 × 10−29

LDL-C

cg27168858

1

55,351,660

78

0.4 (0.3, 0.6)

5.3 × 10−3

 

cg00908766

1

109,817,497

59

1.0 (0.6, 1.3)

2.3 × 10−2

 

cg05119988

4

166,251,190

59

0.5 (0.3, 0.6)

1.4 × 10−4

HDL-C

cg17901584

1

55,353,707

53

0.7 (0.5, 0.9)

1.2 × 10−4

 

cg26313301

19

11,219,616

87

−0.2 (−0.3, −0.1)

3.6 × 10−2

 

cg27243685

21

43,642,367

83

−0.4 (−0.5, −0.3)

1.2 × 10−9

 

cg06500161

21

43,656,588

60

−0.7 (−0.8, −0.5)

1.3 × 10−13

  1. aEstimate is the percentage change in DNA methylation per standard deviation change in lipid levels
  2. DNAm DNA methylation