Simultaneous profiling of transcriptome and DNA methylome from a single cell

Table 1 Simultaneous sequencing of single-cell methylome and transcriptome

Samples	Mouse strain	CpG (1×)	CpG (5×)	Conversion rate	Promoter no. methylome^a	Gene no. intersected with transcriptome^a
sc-1#	129/B6	495,313	342,121	99.59 %	4930	3627
sc-2#	129/B6	362,211	238,120	99.57 %	3905	2901
sc-3#	129/B6	909,730	498,910	99.64 %	6305	4658
sc-4#	129/B6	850,977	547,785	99.48 %	6059	4457
sc-5#	129/B6	565,739	350,744	99.77 %	5234	3911
sc-6#	129/B6	442,073	293,706	99.63 %	4370	3235
sc-7#	129/B6	413,412	231,743	99.94 %	3714	2759
sc-8#	129/B6	240,247	173,079	99.85 %	3106	2315
sc-9#	B6/D2	379,925	233,773	99.55 %	4272	3164
sc-10#	B6/D2	549,887	257,318	99.62 %	4263	3141
sc-11#	B6/D2	437,273	221,168	99.38 %	3675	2708
sc-12#	B6/D2	434,886	183,527	99.57 %	3388	2501
sc-13#	B6/D2	368,404	132,999	99.36 %	2792	2113
sc-14#	B6/D2	456,637	242,423	99.67 %	4032	3015
sc-15#	B6/D2	474,163	220,723	99.49 %	3902	2885

ISSN: 1474-760X