Method | SD low | SD medium | SD high | NE (K = 1) | NN (K = 1) | TxDiff low | TxDiff medium | TxDiff high | deFC low | deFC medium | deFC high | pAUC |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Cufflinks | 0.73 (0.002) | 0.54 (0.003) | 0.26 (0.001) | 0.090 | 0.657 | 0.34 (0.011) | 0.08 (0.003) | 0.05 (0.003) | 0.53 (0.009) | 0.95 (0.006) | 0.98 (0.003) | 0.61 |
eXpress | 0.71 (0.003) | 0.67 (0.004) | 0.30 (0.001) | 0.09 | 0.68 | 0.33 (0.009) | 0.07 (0.003) | 0.07 (0.003) | 0.47 (0.011) | 0.87 (0.015) | 0.91 (0.012) | 0.60 |
Flux Capacitor | 1.03 (0.004) | 1.23 (0.007) | 0.40 (0.002) | 0.15 | 0.63 | 0.46 (0.013) | 0.15 (0.006) | 0.07 (0.004) | 0.39 (0.011) | 0.82 (0.013) | 0.97 (0.009) | 0.52 |
Kallisto | 0.72 (0.003) | 0.55 (0.003) | 0.27 (0.001) | 0.10 | 0.63 | 0.37 (0.011) | 0.08 (0.004) | 0.05 (0.003) | 0.56 (0.008) | 0.95 (0.006) | 0.98 (0.002) | 0.58 |
RSEM | 0.65 (0.002) | 0.48 (0.003) | 0.25 (0.001) | 0.08 | 0.69 | 0.43 (0.011) | 0.07 (0.004) | 0.04 (0.003) | 0.58 (0.008) | 0.96 (0.006) | 1.00 (0.003) | 0.65 |
Sailfish | 0.76 (0.003) | 0.65 (0.004) | 0.30 (0.001) | 0.11 | 0.57 | 0.34 (0.009) | 0.08 (0.004) | 0.05 (0.003) | 0.52 (0.011) | 0.94 (0.011) | 0.96 (0.006) | 0.56 |
Salmon | 0.64 (0.002) | 0.52 (0.003) | 0.26 (0.001) | 0.09 | 0.67 | 0.35 (0.010) | 0.08 (0.004) | 0.05 (0.003) | 0.54 (0.008) | 0.95 (0.007) | 1.00 (0.003) | 0.61 |