Sample
|
SRA ID/ENA ID
|
# of reads
|
Read length
|
# of bases
|
Avg. fragment length
|
---|
3077
|
SRX275526
|
6,029,646
|
76
|
916,506,192
|
60.87
|
Refshale16
|
SRX276068
|
39,915,365
|
76
|
6,067,135,480
|
79.91
|
Jorgen625
|
SRX275549
|
15,101,591
|
200
|
6,040,636,400
|
164.24
|
SK2
|
SRX275535
|
54,243,849
|
100
|
10,848,769,800
|
62.84
|
SK8
|
SRX275538
|
9,898,159
|
76
|
1,504,520,168
|
81.41
|
LBK1
|
SAMEA2697125
|
227,266,922
|
101
|
45,907,918,244
|
69.71
|
LBK2
|
SAMEA2697125
|
222,751,961
|
101
|
44,995,896,122
|
69.69
|
LBK3
|
SAMEA2697125
|
227,779,612
|
101
|
46,011,481,624
|
69.72
|
LBK4
|
SAMEA2697125
|
207,406,901
|
101
|
41,896,194,002
|
69.72
|
LBK5
|
SAMEA2697125
|
207,983,311
|
101
|
42,012,628,822
|
69.67
|
LBK6
|
SAMEA2697125
|
208,835,520
|
101
|
42,184,775,040
|
69.71
|
LBK7
|
SAMEA2697125
|
213,784,583
|
101
|
43,184,485,766
|
69.68
|
LBK8
|
SAMEA2697125
|
228,184,096
|
101
|
46,093,187,392
|
69.71
|
- For the LBK data set, we chose to evaluate a single lane of data (LBK1), as the other samples (LBK2–8) showed very similar features