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Table 2 Genome-scale DNA methylation analysis of 78 normal tissue samples, 714 primary tumors and 24 metastasis samples (HumanMethylation450 BeadChip) and combined expression/DNA methylation analysis of 208 normal and 675 primary tumor samples (TCGA)

From: Epigenomic analysis detects aberrant super-enhancer DNA methylation in human cancer

Cancer type Status Origin Number of samples Number of samples TCGA
Lung Normal Primary sample 26 57
Colon Normal Primary sample 18 41
Breast Normal Primary sample 19 110
Brain (white matter) Normal Primary sample 10 -
Blood (CD19+) Normal Primary sample 5 -
Lung adenocarcinoma Cancer Primary sample 321 216
Lung squamous cell carcinoma Cancer Primary sample 120 -
Colorectal cancer Cancer Primary sample 103 258
Colorectal cancer metastasis Metastasis Primary sample 24 -
Breast cancer Cancer Primary sample 66 201
Small cell lung cancer Cancer Primary sample 56 -
Glioblastoma Cancer Primary sample 48 -