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Table 1 Putative coding Alu exons with significant splicing activities and supporting peptide evidence in proteomics databases

From: The contribution of Alu exons to the human proteome

  Gene symbol Gene ID Exon coordinate (hg19) Gene description MaxJC ≥10 ψ ≥0.33 MaxJC ≥10 |Δψ| ≥10 % In PRIDE In PeptideAtlas
1 SUGT1 ENSG00000165416 chr13:53235609-53235705 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) Yes Yes Yes Yes
2 DNMT1 ENSG00000130816 chr19:10290862-10290910 DNA (cytosine-5-)-methyltransferase 1 Yes Yes Yes Yes
3 C21orf7 ENSG00000156265 chr21:30463988-30464082 Chromosome 21 open reading frame 7 Yes No Yes No
4 ADARB1 ENSG00000197381 chr21:46604388-46604508 Adenosine deaminase, RNA-specific, B1 Yes Yes Yes No
5 ALG8 ENSG00000159063 chr11:77813919-77813994 Asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) Yes No Yes No
6 NEK4 ENSG00000114904 chr3:52783707-52783845 NIMA (never in mitosis gene a)-related kinase 4 Yes No Yes No
7 ZNF415 ENSG00000170954 chr19:53618462-53618560 Zinc finger protein 415 Yes Yes Yes No
8 TPRKB ENSG00000144034 chr2:73959710-73959827 TP53RK binding protein Yes No Yes No
9 C21orf7 ENSG00000156265 chr21:30463821-30463897 Chromosome 21 open reading frame 7 Yes No Yes No
10 C11orf80 ENSG00000173715 chr11:66523823-66523976 Chromosome 11 open reading frame 80 Yes No Yes No
11 ZNF573 ENSG00000189144 chr19:38249115-38249236 Zinc finger protein 573 No Yes Yes No
12 MCM3 ENSG00000112118 chr6:52130032-52130183 Minichromosome maintenance complex component 3 No Yes Yes No
13 SLC3A2 ENSG00000168003 chr11:62639048-62639141 Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 Yes No Yes No
14 EIF4E ENSG00000151247 chr4:99807604-99807697 Eukaryotic translation initiation factor 4E Yes Yes Yes No
15 KCNRG ENSG00000198553 chr13:50592958-50593056 Potassium channel regulator Yes No Yes No
16 FAM124B ENSG00000124019 chr2:225265097-225265222 Family with sequence similarity 124B Yes Yes Yes No
17 B3GALNT2 ENSG00000162885 chr1:235659495-235659618 Beta-1,3-N-acetylgalactosaminyltransferase 2 Yes No Yes No
18 ZNF195 ENSG00000005801 chr11:3382972-3383119 Zinc finger protein 195 Yes Yes Yes No