Fig. 3From: Circlator: automated circularization of genome assemblies using long sequencing readsKey stages of the Circlator pipeline. a Before circularization, input contigs are merged using de novo assemblies of filtered reads. b Circular contigs are resolved using matches to contigs assembled from filtered reads. c Circularized contigs are rearranged to start at the dnaA gene, or a different gene specified by the userBack to article page