Fig. 2
From: Quality control, modeling, and visualization of CRISPR screens with MAGeCK-VISPR
The quality control (QC) view of VISPR, the visualization framework of MAGeCK-VISPR. The measurements include the distribution of GC content (a), median base quality (b), the distribution of mean sequence quality (c), the number of zero-count sgRNAs (d), Gini-index (e), total number of reads and the percentage of mapped reads (f), Principle Component Analysis (PCA) plot (g), normalized read count distribution (h, i), and pairwise sample correlations (j). Shown results are from ESC (a-f) and melanoma dataset (g-j)