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Fig. 5 | Genome Biology

Fig. 5

From: Schmutzi: estimation of contamination and endogenous mitochondrial consensus calling for ancient DNA

Fig. 5

Contamination estimates and phylogenetic placement of Mezmaiskaya 1 (library ID B9687). a The posterior probability distribution for contamination in Mezmaiskaya 1. The dotted line represents the estimate obtained using an ad hoc method based on fixed sites. b A maximum-likelihood tree showing the placement of the mitochondrial genome of Mezmaiskaya 1 (labeled MT in the tree) and the inferred contaminant (labeled MTc in the tree), compared to 20 present-day humans and nine archaic humans

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