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Fig. 4 | Genome Biology

Fig. 4

From: HiCPlotter integrates genomic data with interaction matrices

Fig. 4

A lincRNA locus exhibits active chromatin formation in K562 cells. a Hi-C contact maps are visualized as heatmaps for GM12878 and K562 cells. Histograms representing DNAseI hypersensitivity (b), RNA-Seq expression (c), and Repli-Seq signals (d) for each type. e Tiles mark active transcription start site (red) and transcribed (green) state calls by ChromHMM inside the highlighted genomic segment. The lincRNA locus gaining active chromatin in K562 cells is highlighted by the green shaded column

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