Fig. 3
From: HiCPlotter integrates genomic data with interaction matrices
Cohesin ChIA-PET interactions coincide with early replication sites. a Hi-C contact maps are visualized as heatmaps for GM12878 and K562 cells. Histograms representing DNAseI hypersensitivity (b) and CTCF (c) and Repli-Seq (d) signals for each type. e Tiles mark enhancer calls with ChromHMM inside the visualized genomic segment. f Tiles mark transcribed regions identified with ChromHMM inside the visualized genomic segment. g Tiles mark heterochromatin regions identified with ChromHMM inside the visualized genomic segment. h Arcs visualize significantly interacting ChIA-PET tags for RAD21 inside the represented locus. Late replicating loci are highlighted by the two green shaded columns