Table 2 Locations of the contigs which harbor cloned genes that are absent from the Nipponbare genome
From: Exploring the rice dispensable genome using a metagenome-like assembly strategy
Gene | Genomic position from literature | Assigned genomic position | Minimum distance (bp)a | Contig |
|---|---|---|---|---|
GW5 | Chr05:5360552-5360941 | Chr05:5360245-5360553 | 0 | OsIPC05060021 |
Sub1A | Chr09:6403884-6404699 | Not assigned | Not assigned | OsIPC09070023 |
Xa27 | Chr06:23653458-23654407 | Chr06:23634625-23634930 | 18,528 | OsIPC06240124 |
PSTOL1 | Chr12:15874815-15875229 | Chr12:15874535-15874748 | 67 | OsJPC12160175 |
OsHKT2 | Not assigned | Chr06:29552379-29552608 | Not assigned | OsJPC06300057 |
Pikm1-TS | Chr11: 27506909-27507692 | Chr11:27511712-27511965 | 4020 | OsIPC11280248 |
Pikm2-TS | Chr11:27515464-27517260 | Chr11:27519921-27520230 | 2661 | OsIPC11280253 |