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Fig. 6 | Genome Biology

Fig. 6

From: Exploring the rice dispensable genome using a metagenome-like assembly strategy

Fig. 6

The chromosome distribution of contigs of the dispensable genome and hanging reads. The 12 chromosomes are arranged from top to bottom. The height of the dark green bars denote the number of read pairs of which only one read can be mapped to the reference genome (hanging reads) in each chromosome window (10 kb). The height of the blue bars denotes the number of assembled contigs of the indica dispensable genome while the height of the red bars denotes the number of assembled contigs of the japonica dispensable genome in each chromosome window (10 kb). The height of the grey bars denotes the sequence repeat density represented as the percentage of sequences masked due to repetitiveness in each chromosome window (10 kb). The black points represent the chromosome locations of 12 centromeres

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