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Table 6 Hi-C data sources

From: Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data

Dataset Cell Cell Accession Reference
  line type number  
HiC-EBV-2009 GM06990 LCL (EBV) [GEO:GSE18199] [1]
HiC-EBV-2013 GM12878 LCL (EBV) [GEO:GSE48592] [46]
HiC-EBV-2014 GM12878 LCL (EBV) [GEO:GSE63525] [7]
HiC-IMR90-2013 IMR90 Fibroblast (lung) [GEO:GSE43070] [4]
HiC-IMR90-2014 IMR90 Fibroblast (lung) [GEO:GSE63525] [7]
HiC-fibro-skin Fibroblast (skin) [GEO:GSE41763] [45]
HiC-fibro-HFF1 HFF-1 Fibroblast (skin) E-MTAB-1948 [5]
HiC-K562-2009 K562 Leukemia [GEO:GSE18199] [1]
HiC-K562-2014 K562 Leukemia [GEO:GSE63525] [7]
HiC-mESC-2012 J1 mESC [GEO:GSE35156] [3]