Fig. 7
From: Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data
Mean methylation levels in the 450 k-fibroblast dataset are not associated with technical control probes. For each of the 62 samples from the 450 k-fibroblast dataset, we computed the average methylation level for the open sea probes and looked for association with the array technical control probes. a Average intensity of the negative control probes against the average methylation level. b Same as (a) but for bisulfite conversion efficiency control probes Infinium I. c Same as (b) but for bisulfite conversion efficiency control probes Infinium II. We conclude that the average methylation levels are not associated with known technical covariates