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Table 7 Final parameter training using 2,794 training genes and results on ab initio performance

From: Exploiting single-molecule transcript sequencing for eukaryotic gene prediction

 

Parameter evaluation on 349 test genes

Training parameter

Exon level

Transcript level

Sum

Rank

UTR bases

 

Sensitivity

Precision

Sensitivity

Precision

  

Sensitivity

Precision

A. thaliana parameters

0.810

0.527

0.368

0.192

1.899

2

0.678

0.281

B. vulgaris parameters

0.842

0.664

0.461

0.341

2.308

1

0.547

0.508