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Fig. 3 | Genome Biology

Fig. 3

From: OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy

Fig. 3

Comparison of OrthoFinder to other orthogroup inference methods. a The length dependency of OrthoMCL. b The length dependency of OrthoMCL using our normalised similarity scores. c The length dependency of the complete OrthoFinder algorithm. For A-C scores were calculated as in Fig. 1c. d Comparison of the results of OrthoFinder F-score with all other methods tested in OrthoBench. e As in (d) but for recall. f As in (d) but for precision. The error bars show the lower and upper limits of sequence lengths corresponding to the shortest and longest sequences in each bin and the dot shows the geometric mean of these lengths

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Genome Biology

ISSN: 1474-760X

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