Number | Strain | Accession | G+C % | Finishing status†| Number of contigs | Number of proteins | Length (bp) | MLST ST | MLST allelic profile§ | Origin/site | Country | City | Year | Reference |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1) | OIFC137 | AFDK00000000 | 36.9 | IHQD | 4 | 3871 | 4,081,420 | 3 | 3-3-2-2-3-1-3 | Catheter tip | USA | Washington, DC | 2003 | Â |
2) | OIFC032 | AFCZ00000000 | 40.8 | IHQD | 4 | 3718 | 3,893,886 | 32 | 1-1-2-2-3-4-4 | Wound | Germany | Landstuhl | 2003 | [8] |
3) | OIFC109 | ALAL00000000 | 38.4 | IHQD | 13 | 3945 | 4,107,121 | 3 | 3-3-2-2-3-1-3 | Right residual limb wound | USA | Washington, DC | 2003 | [8] |
4) | OIFC143 | AFDL00000000 | 37.3 | IHQD | 8 | 4265 | 4,441,327 | 25 | 3-3-2-4-7-2-4 | Thigh wound | USA | Washington, DC | 2003 | Â |
5) | OIFC189 | AFDM00000000 | 44.1 | IHQD | 10 | 3849 | 4,043,115 | 2 | 2-2-2-2-2-2-2 | Wound | USA | Bethesda, MD | 2003 | [88] |
6) | Canada BC-5 | AFDN00000000 | 38.0 | IHQD | 3 | 3787 | 3,998,016 | 1 | 1-1-1-1-5-1-1 | Clinical isolate | Canada* | NA | 2007 | Â |
7) | Naval-17 | AFDO00000000 | 42.9 | IHQD | 21 | 3848 | 4,009,964 | 2 | 2-2-2-2-2-2-2 | Wound | USA | Bethesda, MD | 2006 | [87] |
8) | Naval-18 | AFDA00000000 | 37.6 | IHQD | 11 | 4406 | 4,454,613 | 25 | 3-3-2-4-7-2-4 | Wound | USA | Bethesda, MD | 2006 | [87] |
9) | Naval-81 | AFDB00000000 | 36.5 | IHQD | 5 | 3981 | 4,080,872 | 3 | 3-3-2-2-3-1-3 | Blood | USA | Bethesda, MD | 2006 | Â |
10) | IS-123 | ALII00000000 | 38.7 | IHQD | 20 | 4013 | 4,063,081 | 3 | 3-3-2-2-3-1-3 | Wound | Iraq | Baghdad | 2009 | Â |
11) | OIFC074 | AMDE00000000 | 40.5 | HQD | 66 | 3815 | 3,935,888 | 19 | 1-2-1-1-5-1-1 | Clinical isolate | Germany | Landstuhl | 2003 | Â |
12) | OIFC098 | AMDF00000000 | 39.5 | HQD | 72 | 3659 | 3,812,112 | 10 | 1-3-2-1-4-4-4 | Clinical isolate | Germany | Landstuhl | 2003 | Â |
13) | OIFC180 | AMDQ00000000 | 40.1 | HQD | 141 | 3942 | 3,986,823 | 2 | 2-2-2-2-2-2-2 | Clinical isolate | USA | NA | 2003 | Â |
14) | Naval-13 | AMDR00000000 | 40.6 | HQD | 64 | 3948 | 4,107,737 | 3 | 3-3-2-2-3-1-3 | Wound | USA | Bethesda, MD | 2006 | [87] |
15) | IS-235 | AMEI00000000 | 41.0 | HQD | 76 | 3981 | 4,060,387 | 1 | 1-1-1-1-5-1-1 | Blood | Iraq | Baghdad | 2008 | [88] |
16) | IS-251 | AMEJ00000000 | 39.6 | HQD | 72 | 3908 | 4,007,286 | 1 | 1-1-1-1-5-1-1 | Respiratory tract | Iraq | Baghdad | 2008 | [88] |
17) | OIFC0162 | AMFH00000000 | 39.4 | HQD | 55 | 3856 | 4,078,399 | 412 | 1-52-2-2-67-4-5 | Trachea | USA | Washington, DC | 2003 | [8] |
18) | Naval-72 | AMFI00000000 | 41.2 | HQD | 52 | 3607 | 3,840,453 | 405 | 5-3-16-4-29-1-60 | Wound | USA | Bethesda, MD | 2006 | [87] |
19) | Naval-83 | AMFK00000000 | 39.7 | HQD | 103 | 4000 | 4,106,603 | 20 | 3-1-1-1-5-1-1 | Wound | USA | Bethesda, MD | 2006 | [87] |
20) | OIFC110 | AMFL00000000 | 40.3 | HQD | 53 | 3818 | 3,981,666 | 515 | 56-3-2-2-9-4-14 | Clinical isolate | Germany | Landstuhl | 2003 | Â |
21) | IS-143 | AMGE00000000 | 41.1 | HQD | 93 | 3883 | 4,020,019 | 414 | 2-2-2-2-2-37-2 | Wound | Iraq | Baghdad | 2008 | Â |
22) | IS-116 | AMGF00000000 | 40.0 | HQD | 40 | 3779 | 3,952,511 | 136 | 3-2-19-25-5-2-5 | Wound | Iraq | Baghdad | 2008 | Â |
23) | WC-692 | AMGG00000000 | 39.7 | HQD | 79 | 4004 | 4,183,446 | 513 | 56-3-55-2-9-4-14 | Intact skin surface | Iraq | NA | 2008 | Â |
24) | IS-58 | AMGH00000000 | 40.9 | HQD | 61 | 3944 | 4,063,888 | 1 | 1-1-1-1-5-1-1 | Respiratory tract | Iraq | Baghdad | 2008 | [88] |
25) | WC-487 | AMZR00000000 | 39.5 | HQD | 121 | 3994 | 4,115,076 | 410 | 20-26-26-14-26-16-23 | Skin | USA | Bethesda, MD | 2008 | Â |
26) | WC-348 | AMZT00000000 | 39.2 | HQD | 61 | 3897 | 4,108,488 | 412 | 1-52-2-2-67-4-5 | Intact skin surface | Iraq | NA | 2008 | Â |
27) | Naval-113 | AMZU01000000 | 49.7 | HQD | 130 | 4002 | 4,095,626 | 2 | 2-2-2-2-2-2-2 | Wound | USA | Bethesda, MD | 2006 | [87] |
28) | Naval-82 | AMSW00000000 | 38.2 | HQD | 197 | 3969 | 3,908,929 | 428 | 3-1-2-3-6-1-16 | Blood | USA | Bethesda, MD | 2006 | [87] |
29) | Naval-2 | AMSX00000000 | 39.5 | HQD | 114 | 4074 | 4,126,550 | 2 | 2-2-2-2-2-2-2 | Blood | USA | Bethesda, MD | 2006 | [87] |
30) | Naval-21 | AMSY00000000 | 40.0 | HQD | 75 | 3829 | 3,923,796 | 19 | 1-2-1-1-5-1-1 | Wound | USA | Washington, DC | 2006 | [87] |
31) | Canada BC1 | AMSZ00000000 | 39.7 | HQD | 66 | 3825 | 3,936,404 | 1 | 1-1-1-1-5-1-1 | Nosocomial infection | Canada | NA | 2007 | Â |
32) | WC-A-694 | AMTA00000000 | 39.7 | HQD | 82 | 3830 | 4,008,103 | 3 | 3-3-2-2-3-1-3 | Clinical isolate | USA | Washington, DC | 2008 | Â |
33) | OIFC035 | AMTB00000000 | 43.0 | HQD | 44 | 3741 | 3,972,611 | 403 | 3-2-6-1-3-4-59 | Groin wound | USA | Washington, DC | 2003 | Â |
34) | Naval-57 | AMFP00000000 | 40.7 | HQD | 138 | 3838 | 3,953,596 | 155 | 3-2-2-2-44-4-4 | Wound | USA | Bethesda, MD | 2006 | Â |
35) | OIFC087 | AMFS00000000 | 39.1 | HQD | 96 | 3922 | 4,004,682 | 32 | 1-1-2-2-3-4-4 | Perineum | USA | Washington, DC | 2003 | Â |
36) | OIFC099 | AMFT00000000 | 40.1 | HQD | 75 | 3748 | 3,918,177 | 32 | 1-1-2-2-3-4-4 | Environmental sample | USA | Washington, DC | 2003 | [8] |
37) | WC-A-92 | AMFU00000000 | 38.1 | HQD | 151 | 3802 | 3,838,812 | 431 | 1-4-2-1-70-1-2 | Clinical isolate | USA | Washington, DC | 2007 | Â |
38) | OIFC065 | AMFV00000000 | 39.5 | HQD | 54 | 3893 | 4,029,646 | 136 | 3-2-19-25-5-2-5 | Left leg | USA | Washington, DC | 2003 | Â |
39) | OIFC047 | AMFW00000000 | 39.2 | HQD | 39 | 3505 | 3,740,684 | Novel | 1-75-2-2-67-1-2 | Perineum | USA | Washington, DC | 2003 | Â |
40) | OIFC338 | AMFX00000000 | 40.1 | HQD | 108 | 4081 | 4,155,681 | 2 | 2-2-2-2-2-2-2 | Clinical isolate | USA | Washington, DC | 2003 | Â |
41) | OIFC111 | AMFY00000000 | 40.8 | HQD | 44 | 3732 | 3,988,061 | 49 | 3-3-6-2-3-1-5 | Perineum | USA | Washington, DC | 2003 | Â |
42) | Naval-78 | AMFZ00000000 | 39.9 | HQD | 112 | 3950 | 4,053,379 | 2 | 2-2-2-2-2-2-2 | Wound | USA | Bethesda, MD | 2006 | [87] |
43) | AA-014 | AMGA00000000 | 39.4 | HQD | 61 | 3618 | 3,857,932 | 158 | 41-42-13-1-5-4-14 | Wound | Iraq | Al Anbar | 2008 | Â |
44) | MRSN 3405 | JPIA00000000 | 38.3 | IHQD | 64 | 3958 | 4,082,715 | 94 | 1-2-2-1-5-1-1 | Wound | USA | Washington, DC | 2011 | [15] |
45) | MRSN 3527 | JPHZ00000000 | 38.7 | IHQD | 46 | 4101 | 4,206,186 | 81 | 1-1-1-1-5-1-2 | Wound | USA | Washington, DC | 2011 | [15] |
46) | MRSN 3942 | JPHY00000000 | 38.4 | IHQD | 69 | 3849 | 3.975,719 | 94 | 1-2-2-1-5-1-1 | Wound | USA | Washington, DC | 2011 | [15] |
47) | MRSN 4106 | JPHX00000000 | 38.6 | IHQD | 62 | 3824 | 3,952,684 | 94 | 1-2-2-1-5-1-1 | Wound | USA | Washington, DC | 2011 | [15] |
48) | MRSN 58 | JPHW00000000 | 39.8 | IHQD | 40 | 3866 | 3,974,176 | 1 | 1-1-1-1-5-1-1 | Wound | USA | Washington, DC | 2010 | [20] |
49) | MRSN 7339‡ | JPHV00000000 | 39.3 | IHQD | 34 | 3787 | 3,955,466 | 1 | 1-1-1-1-5-1-1 | Wound | USA | Washington, DC | 2004 |  |
50) | MRSN 7341‡ | JPIB00000000 | 39.4 | IHQD | 52 | 3766 | 3,911,280 | 2 | 2-2-2-2-2-2-2 | Respiratory | USA | Washington, DC | 2004 |  |