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Fig. 2 | Genome Biology

Fig. 2

From: The impact of read length on quantification of differentially expressed genes and splice junction detection

Fig. 2

Determination of differentially expressed genes according to read length and differential expression method. a Single-end read samples. The number of orphan genes (read-length-specific genes) in the overlap of the top 200 genes sorted by -Log2-based fold change (-Log2FC; down-regulated), +Log2FC (up-regulated) and p value. b Paired-end read samples. The number of orphan genes (read-length-specific genes) in the overlap of the top 200 genes sorted by -Log2FC, +Log2FC and p value. c Single-end read samples. The plot shows the agreement for the top 200 differentially expressed genes by different read length. d Paired-end read samples. The plot shows the agreement for the top 200 differentially expressed genes by different read length

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Genome Biology

ISSN: 1474-760X

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