From: A versatile reporter system for CRISPR-mediated chromosomal rearrangements
Name | Replicate | Position | Ref | Indel | Reads supporting ref | Reads supporting indel | VarFreq | P value |
---|---|---|---|---|---|---|---|---|
iGFP | 1 | 235 | A | +G | 2631 | 4158 | 55.31 % | 0 |
236 | G | -A | 1786 | 257 | 11.83 % | 7.64E-78 | ||
235 | A | +GG | 2631 | 580 | 7.72 % | 4.36E-181 | ||
236 | G | -AC | 1786 | 50 | 2.30 % | 1.67E-14 | ||
236 | G | -ACT | 1786 | 35 | 1.61 % | 4.61E-10 | ||
iGFP | 2 | 235 | A | +G | 2662 | 4152 | 55.50 % | 0 |
236 | G | -A | 1852 | 276 | 12.40 % | 6.55E-84 | ||
235 | A | +GG | 2662 | 548 | 7.33 % | 3.92E-170 | ||
236 | G | -AC | 1852 | 35 | 1.57 % | 4.63E-10 | ||
LoxP-O | 1 | 304 | A | +T | 2278 | 4386 | 64.55 % | 0 |
305 | T | -A | 1590 | 42 | 2.51 % | 3.88E-12 | ||
302 | T | -TA | 7165 | 144 | 1.96 % | 5.96E-35 | ||
303 | T | -A | 6941 | 91 | 1.29 % | 3.68E-20 | ||
LoxP-O | 2 | 304 | A | +T | 2267 | 4429 | 64.89 % | 0 |
305 | T | -A | 1595 | 48 | 2.87 % | 6.36E-14 | ||
302 | T | -TA | 7186 | 140 | 1.90 % | 8.19E-34 | ||
303 | T | -A | 6974 | 82 | 1.16 % | 9.96E-18 | ||
LSL | 1 | 88 | T | +A | 1804 | 2533 | 56.19 % | 0 |
89 | A | -T | 1403 | 41 | 2.74 % | 7.43E-12 | ||
87 | G | -T | 4896 | 89 | 1.72 % | 2.15E-22 | ||
87 | G | -TA | 4896 | 87 | 1.68 % | 8.00E-22 | ||
86 | C | -GTATAAT | 5204 | 78 | 1.47 % | 2.49E-18 | ||
89 | A | -TAAT | 1403 | 15 | 1.00 % | 2.51E-04 | ||
LSL | 2 | 88 | T | +A | 1708 | 2602 | 58.47 % | 0 |
89 | A | -T | 1353 | 41 | 2.83 % | 7.36E-12 | ||
87 | G | -TA | 4820 | 95 | 1.85 % | 4.07E-24 | ||
87 | G | -T | 4820 | 87 | 1.69 % | 7.96E-22 | ||
86 | C | -GTATAAT | 5144 | 63 | 1.20 % | 3.26E-14 | ||
89 | A | -TAAT | 1353 | 17 | 1.17 % | 6.93E-05 | ||
Pten-deletion | 1 | 453 | A | +C | 6477 | 1110 | 14.16 % | 0 |
453 | A | -T | 6477 | 79 | 1.01 % | 9.97E-18 | ||
Pten-deletion | 2 | 453 | A | +C | 6607 | 1039 | 13.33 % | 2.08E-314 |