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Table 1 Summary statistics

From: Detecting non-allelic homologous recombination from high-throughput sequencing data

  Number of loci Number of distinct Median calls/ Median number Number previously Number positively Median affected Number in Number in Number in
  with an event call a loci with an NAHR person b of people/locus reported c validated d genes/person Africans c Asians c Europeans c
   event call b   with call       
Deletion 321 (2.25%) 65 (20.1%) 5.5 (1.7%) 4 (9.09%) 106 (33.0%) 59 (18.4%) 7.5 120 (37.4%) 123 (38.3%) 78 (24.3%)
Duplication 722 (5.06%) 64 (19.8%) 16 (4.94%) 3 (6.82%) 0 0 42.5 311 (43.1%) 186 (25.8%) 225 (31.2%)
Total 1,043 (7.32%) 109 (33.6%) 24 (7.41%) 5 (11.4%) 106 (10.2%) 59 (5.7%) 52 431 (41.3%) 309 (29.6%) 303 (29.1%)
  1. aOut of all 44×324=14,256 potential NAHR event loci.
  2. bOut of all possible 324 distinct loci.
  3. cOut of the number of positive event calls.
  4. dSubset of number previously reported. Validations from [3,4,17]. Non-positively validated calls were not negatively validated; see Additional file 1: Section S7.6.