Metric | Value |
---|---|
Scaffold N50 | 204 Kbp (REAPR 155 Kbpa) |
Number of scaffolds ≥3 Kbp | 20,158 |
Number of scaffolds ≥1 Kbp | 45,354 |
Contig N50 (≥100 bp) | 9.7 K bp |
Number of contigs (≥100 bp) | 254,014 |
Total assembly length | 1.275 Gbp |
Total length of gaps | 91.6 Mbp |
Repetitive content | 32% |
Number of RNAseq-supported gene models | 22,676 (15,740b) |
Mean number of exons/gene | 5.3 |
Mean exon size (95% range) | 303 bp (36 bp – 1,369 bp) |
Mean intron size (95% range) | 3.7 Kbp (33Â bp - 17.5 Kbp) |
Proportion CEGMA core eukaryotic genes found | 90% |