From: A depauperate immune repertoire precedes evolution of sociality in bees
Gene | Putative gene function | NCBI accession | Forward primer | Reverse primer | Product size (base pairs) |
---|---|---|---|---|---|
AK | Arginine kinase, housekeeping | AF_492888 | CTGGACTCTGGTGTCGGTAT | GTCTTTTGGTGGATGCTTGT | 129 |
PLA2 | Phospholipase A2, housekeeping | FN_391388 | TATCTTTCAATGCCCAGGAG | GTCGTAACAAATGTCATGCG | 129 |
ef1α | Elongation factor 1α | XM_003401944 | GCTGGTGACTCGAAGAACAATC | GGGTGGTTCAACACAATAACCTG | 74 |
BGRP1 | Recognition receptor, Toll pathway | XM_003397996 | AACGTGGAAGTCAAAGATGG | GCGAACGATGACTTGGTATT | 206 |
BGRP2 | Recognition receptor, Toll pathway | XM_003394713 | TAACTCCCTTTGGAAACACG | GGCGGTAAAATACTGAACGA | 249 |
PGRP-S1 | Recognition receptor, Imd pathway | XM_003400112 | TTTCCATGTTGCTCGCTTCG | CGCGGTTTCCCTTTCGATATTAG | 77 |
PGRP-LC | Recognition receptor, Imd pathway | XM_003396463 | CAGCCACCTACGACAGATTT | GTACATTCCGCTTGTGTCCT | 101 |
PGRP-SA | Recognition receptor, Toll pathway | XM_003401893 | CGTGAAGGAGCTCATACCAT | CCAGGACTCATAGTGGCTGT | 200 |
PGRP-SC2 | Recognition receptor, Imd pathway | XM_003493213 | TTGGTTGGCGAAGATGGAAAC | CGCGCTTGGATTATGACCAAC | 132 |
pelle | Signal molecule, Toll pathway | XM_003399470 | TAAATCGACCTATGCAAGCC | GGGTATAGCTGCTTCTGCTG | 107 |
relish | Signal molecule, Imd pathway | XM_003399472 | CAGCAGTAAAAATCCCCGAC | CAGCACGAATAAGTGAACATA | 156 |
basket | Signal molecule, JNK pathway | XM_003402794 | GGAACAAGATAATCGAGCAACTG | CTGGCTTTCAATCGGTTGTG | 177 |
hopscotch | Signal molecule, JAK/STAT pathway | XM_003401903 | CACAGACTGAAGCAGGTTGA | CATATGGGTAATTTGGTGCC | 353 |
abaecin | Antimicrobial peptide (AMP) | XM_003394653 | GCCACAATATGTGGAATCCT | ATGACCAGGGTTTGGTAATG | 141 |
apidaecin | Antimicrobial peptide (AMP) | XM_003402966 | CCCGACTAATGTACCTGCCA | GAAGGTGCGAATGTGTTGGA | 131 |
defensin | Antimicrobial peptide (AMP) | XM_003395924 | GTCTGCCTTTGTCGCAAGAC | GACATTAGTCGCGTCTTCTTCG | 139 |
hymenoptaecin | Antimicrobial peptide (AMP) | XR_132450 | TTCATCGTACTGGCTCTCTTCTG | AGCCGTAGTATTCTTCCACAGC | 85 |
TEPA | Effector molecule, JAK/STAT pathway | XM_003399699 | GCGTTCTATGACCACCTGTT | TACAGGTTACTCCACAGCCC | 212 |
lysozyme3 | Bacteriolytic effector | XM_003394052 | TATGGGCAAGAAGATTCGAC | GTGTACATCGTTCACGCATC | 219 |
transferrin | Iron-binding protein, antibacterial | XM_003401163 | CAATTTCTTCACCGCATCCT | CCTCGTTATTTGGCTTGCAT | 131 |
ferritin | Iron transportation protein | XM_003393332 | AAAGAATTGGACGCAAATGG | CAGCGAACTGATGTCCAAGA | 259 |
serpin27a | Serine protease inhibitor, prophenoloxidase cascade | XM_003392985 | CCGATCATCCATTCGTATTC | ACCTGCACTTGATATCCCTG | 164 |
PPO | Prophenoloxidase, melanin synthesis | HM142999 | AGCGGCATAATACGTTGTGT | CCGAGGGATAGAAAGTCTCC | 329 |
punch | Enzyme, melanin synthesis | XR_131852 | ATTGCCAGGACACTTTCAAC | TACAAGCTGGAAACGGAAAC | 211 |
kayak | JNK pathway | Bter:08277927 | ACGCAATATGGGTGGCAGAA | TGAACGAAGACGACAGACCG | 271 |
serpin 3/4A | Novel serine protease inhibitor | XM_003399138 | GCAGAGACAAATGTTGAAGCAC | CACAGTCTGGGATAATGAAGAACC | 78 |
serpin 3/4B | Novel serine protease inhibitor | XM_003399140 | ATGGTGCTTTGTTCATCAGTCG | GACCCAATGACAGCAGTAACAG | 97 |
alaserpin | Novel serine protease inhibitor | XM_003399139 | TGCTGAAATGCTAGATGACACG | GCATATCGCTCGTTAACTCAGG | 104 |
argonaute 2 | RNA-interference, possible antiviral function | XM_003398481 | AATTGCAAGATCAACCTGCC | CCTACCCAAAGACAAGGCAA | 175 |
aubergine | RNA-interference, possible antiviral function | XM_003400641/XM_003400642 | GTCGCCCTTCTGCATATCTC | AAGATCGAACTGCTATCCGC | 190 |
decay | Caspase mediating apoptosis | XM_003399921 | AAGAAGACCTCGGTCCTTAGAC | CAGCTGCAAATGAAGTAATGCG | 74 |