Table 1 MAD values, signal, and signal-to-noise ratios of CopywriteR and SNP6-derived copy number profiles from the PDX-derived human melanoma sample set
From: CopywriteR: DNA copy number detection from off-target sequence data
| Â | CopywriteR | SNP6 | Â | ||||
|---|---|---|---|---|---|---|---|
MAD | Signal | SNR | MAD | Signal | SNR | Genomic location | |
T98 | 0.206 | 0.722 | 3.50 | 0.547 | 0.721 | 1.32 | chr6p |
T99 | 0.241 | 0.344 | 1.43 | 0.610 | 0.302 | 0.50 | chr16 |
T100 | 0.225 | 0.618 | 2.75 | 0.680 | 0.649 | 0.95 | chr1q |
T101 | 0.252 | 0.996 | 3.95 | 0.927 | 0.829 | 0.89 | chr1q |
T102 | 0.248 | 0.592 | 2.39 | 0.753 | 0.617 | 0.82 | chr8q |
T103 | 0.237 | 0.978 | 4.13 | 0.516 | 0.931 | 1.80 | chr2q |