Table 3 Precision and recall for predicting distal P300, gene-distal regulatory modules and VISTA enhancers
From: Spectacle: fast chromatin state annotation using spectral learning
Cell type | Data set | Spectacle | ChromHMM |
|---|---|---|---|
GM12878 | Distal P300 | 0.129, 0.421 | 0.116, 0.407 |
| Â | DRM [43] | 0.190, 0.375 | 0.174, 0.369 |
| Â | VISTA | 0.001, 0.048 | 0.001, 0.053 |
H1-hESC | Distal P300 | 0.102, 0.477 | 0.144, 0.342 |
| Â | DRM [43] | 0.115, 0.468 | 0.160, 0.332 |
| Â | VISTA | 0.004, 0.273 | 0.005, 0.149 |
K562 | Distal P300 | 0.060, 0.204 | 0.057, 0.196 |
| Â | DRM [43] | 0.039, 0.178 | 0.039, 0.181 |
| Â | VISTA | 0.002, 0.133 | 0.002, 0.129 |