|
Contig number
|
62,459
|
|
N50 contig length
|
60,906
|
|
Contig length average
|
16,438
|
|
Largest contig
|
575,284
|
|
Degen contigs total length
|
104,692,948
|
|
Contigs total length
|
1,026,679,711
|
|
Superscaffold number
|
3,665
|
|
N50 superscaffold length
|
25,151,939
|
|
Superscaffold length average
|
286,906
|
|
Largest superscaffold
|
88,717,954
|
|
Superscaffolds total length
|
1,051,512,088
|
- The assembly consists of 62,459 contigs with an N50 length of 60.91 kbp that add up to a consensus length of 1.027 Gbp. The contigs were ordered to 3,899 scaffolds with an N50 length of 10.77 Mbp. These could be combined to 3,665 superscaffolds by adding collinearity information from the zebra finch. The superscaffolds span a length of 1.051 Gbp and exhibit an N50 length of 25.15 Mbp. Because approximately 81% of the reads were assembled in the contigs, the complete genome of the canary should be approximately 1.2 Gbp in size. Data are given as bp.
