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Table 1 Transcripts remaining after application of various filtering steps

From: Analysis of long non-coding RNAs highlights tissue-specific expression patterns and epigenetic profiles in normal and psoriatic skin

     

Novel

Filter

Protein coding

Antisense

Pseudogene

Annotated lncRNA

Intronic

Intergenic

Interleaving

Encompassing

Raw

16,246

2,902

3,670

4,593

823

1,825

142

113

≥5% (11) samples

16,225

2,897

3,650

4,585

822

1,820

141

112

Distance (≥2 kb)

16,225

2,897

3,650

4,585

336

1,269

22

46

Mappability

14,468

2,338

1,698

3,646

249

993

18

36

Length (≥200 bp)

14,461

2,336

1,693

3,642

244

984

18

36

≥216 mapped reads

14,011

2,294

1,476

2,942

196

840

15

29

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Genome Biology

ISSN: 1474-760X

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