De novo sequence
|
Insert size (bp)
|
Total data (Gb)
|
Sequence coverage ( x genome)
|
Total data (Gb)
|
Sequence coverage (x genome)
|
170-800
|
141
|
113
|
53
|
42
|
2-20 × 103
|
54
|
43
|
36
|
29
|
Total
|
195
|
156
|
89
|
71
|
Assembly
|
|
N50 (kb)
|
Total size (Gb)
|
N50 (kb)
|
Total size (Gb)
|
Contigs
|
67
|
1.24
|
24
|
1.16
|
Scaffolds
|
10,687
|
1.26
|
3,051
|
1.21
|
Annotation
|
|
Number
|
Total length (Mb)
|
Number
|
Total length (Mb)
|
Repeats
|
840,220
|
80
|
861,413
|
86
|
Genes
|
17,179
|
343
|
17,032
|
326
|
Coding exons
|
148,003
|
24
|
139,080
|
23
|
Resequencinga
|
|
Total data (Gb)
|
Sequence coverage (x genome)
|
Total data (Gb)
|
Sequence coverage (x genome)
|
Each individual
|
25
|
20
|
30
|
24
|
All individuals
|
200
|
160
|
149
|
119
|
SNP calling
|
|
Total SNPs
|
Mutation rateb (θS) (×10-3)
|
Total SNPs
|
Mutation rateb (θS) (×10-3)
|
Autosome
|
1,188,930
|
0.33
|
8,876,153
|
2.91
|
Coding exons
|
13,459
|
0.17
|
91,820
|
1.45
|