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Figure 4 | Genome Biology

Figure 4

From: Evaluation of de novo transcriptome assemblies from RNA-Seq data

Figure 4

Guided perturbation results. RSEM-EVAL (top row) and maximum likelihood (bottom row) scores of true assemblies for different values of the minimum overlap length w on both simulated (left column) and real (right column) data sets. The maximizing values (red circles) are achieved at w=0, w=2, w=75 and w=75 in a top-down, left-right order. For better visualization of the maximizing values of w, RSEM-EVAL scores for the local regions around the maximal values are shown in Additional file 1: Figure S2.

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