Figure 1From: The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomesCore-genome SNP accuracy for simulated E. coli datasets. Results are averaged across low, medium, and high mutation rates. Red squares denote alignment-based SNP calls on draft assemblies, green squares alignment-based SNP calls on closed genomes, and blue triangles for read mapping. Full results for each dataset are given in Table 1.Back to article page