Table 1 Features of the assembled genomes and gene sets of Nilaparvata lugens and another hemipteran insect, Acyrthosiphon pisum
| Â | N. lugens | A. pisum |
|---|---|---|
Assembled genome size (Mb) | 1,141 | 464 |
Estimated size (based on k-mer analysis, Mb) | 1,220 | Â |
Number of chromosomes | 30 | 4 |
Contig N50/scaffold N50 (kbp) | 24.2/356.6 | 11.8/86.9 |
Assembly evaluation (covered by assembly) | ||
ESTs (%) | 95.6 | 99 |
CEGMA genes (%) | 96.8 | 100 |
Genomic features | ||
Repeat (%) | 48.6 | 33.3 |
G + C (%) | 34.6 | 29.6 |
Coding (%) | 2.74 | 6.45 |
Intron (%) | 25.3 | 24.6 |
Number of tRNAs | 2,630 | - |
Gene repertoire | ||
Number of protein-coding genes | 27,571 | 33,267 |
with InterPro domains | 12,734 | 13,878 |
with Gene Ontology terms | 10,245 | 10,980 |
Species-specific genes | 16,330 | 19,586 |