Figure 8
From: Functional normalization of 450k methylation array data improves replication in large cancer studies
Comparison to batch effect removal tools SVA, RUV and ComBat. (a) Like Figure 2a, an ROC curve for the Ontario-EBV data set. (b) Like Figure 3a, an ROC curve for the TCGA-KIRC data set. (c) Like Figure 3b, a concordance curve between the validation cohort from 450k data and the 27k data for the TCGA-KIRC data set. (d) Like Figure 4a, concordance plots between results from the 450k array and the 27k array for the TCGA-AML data set. (e) Like Figure 5a, an ROC curve for the Ontario-Blood data set. AML, acute myeloid leukemia; EBV, Epstein–Barr virus; Funnorm, functional normalization; ROC, receiver operating characteristic.