Table 1 Selected site-level features by correlation-based feature selection
From: mirMark: a site-level and UTR-level classifier for miRNA target prediction
Feature | Description |
|---|---|
miR_match_P01 | Match status of miRNA position 1 |
miR_match_P03 | Match status of miRNA position 3 |
miR_match_P04 | Match status of miRNA position 4 |
miR_match_P08 | Match status of miRNA position 8 |
miR_match_P15 | Match status of miRNA position 15 |
Seed_bulge | Number of bulges in seed region |
Total_AU | Number of AU matches in target site |
Total_mismatch | Number of mismatches in target site |
Total_bulge | Number of bulges in target site |
Total_bulge_nt | Number of nucleotides within bulges in target site |
Seed_P01_acc | Accessibility score position 1 of seed region |
Seed_cons_score | Conservation score of seed region |