Samples | Position | AA change | Codon change | Sequence context |
---|
Control | 1409 | E495G | GAA?>?GGA | Â |
1472 | R491Q | CGG?>?CAG | GCCGG |
1503 | Silent | TTT?>?TTC | Â |
AID | 298 | G100C | GGC?>?TGC | GCCTA |
395 | Silent | AAA?>?AAG | Â |
568 | G190D | GGC?>?GAC | TGCCA |
633 | T212A | ACG?>?GCG | Â |
Rat APOBEC1 | 344 | G155D | GGC?>?GAC | GGCCA |
607 | L203M | CTG?>?ATG | CCCTG |
613 | E205K | GAG?>?AAG | CTCGG |
764 | K255T | AAG?>?ACG | Â |
987 | Silent | GGG?>?GGT | TTCCC |
Human APOBEC1 | 669 | Silent | AGC?>?AGT | AGCCG |
758 | R253H | CGC?>?CAC | TGCGC |
841* | Silent | CTG?>?TTG | AGCTG |
697 | H233D | CAT?>?GAT | TTCAT |
699 | H233D | CAT?>?GAC | Â |
1149* | Silent | GCC?>?GCA | GCCAT |
1245* | F415L | TTT?>?TTG | Â |
- The region analyzed (encompassing exon 13 of BCR and exon 9 of ABL1) includes the imatinib-binding region of the fusion gene. The asterisk indicates mutations found in the same clone. The local sequence context for the mutations at cytosines is shown. Compared to the AID-induced mutations found in previous reports (mutations in approximately 30% of the sequences) [41], [42], we found approximately one mutation in each of the clones analyzed. This is explained by the different procedures we used to select resistant clones: whereas the other studies focused on competing bulk populations of AID-transfected GFP(+) cells and control GFP(?) cells, we analyzed individual clones arising from the same number of cells plated in the presence of imatinib.