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Table 1 CIRS-seq efficiency on validated secondary structures

From: Genome-wide profiling of mouse RNA secondary structures reveals key features of the mammalian transcriptome

   Including helix termini Excluding helix termini
ENSEMBL ID Symbol TP (%) FP (%) TP (%) FP (%)
ENSMUST00000082420 mt-Te 87.5 12.5 87.5 12.5
ENSMUST00000082389 mt-Ti 75.0 25.0 100.0 0.0
ENSMUST00000082399 mt-Tn 90.0 10.0 90.0 10.0
ENSMUST00000083033 U1 83.4 16.6 94.7 5.3
ENSMUST00000082496 U5 73.7 26.3 100.0 0.0
ENSMUST00000082466 U3 75.0 25.0 96.9 1.1
Total 80.6 19.4 96.3 3.7
  1. Percentages of true positive (TP) and false positive (FP) highly reactive positions for known secondary structures.