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Table 2 Percentage of PCR validated events recalled from CEU trio by the different algorithms

From: Mobster: accurate detection of mobile element insertions in next generation sequencing data

 

Alu events

L1 events

Nr PCR events

1029

99

Mobster

98.7

89.8

Tangram

98.1

85.5

RetroSeq

97.8

83.8

alu-detect

95.1a

NA

Tea

91.1

80.7

  1. aRecall calculated based on NA12878 (408 PCR validated Alu events).
  2. Values in bold depict best performing algorithm.