Table 1 OncoCis annotation of the TERT promoter mutations chr5:1,295,228 G > A and 1,295,250 G > A
From: OncoCis: annotation of cis-regulatory mutations in cancer
| Â | Â | Â | Â | Â | Â | Â | Â | Â | Motifs | Fantom5 | RegulomeDB | Funseq | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Chromosome | Position | Gene | Distance to TSS | DHS | H3K4me1 | H3K4me3 | H3K27ac | Conservation mutated base | Created | Removed | Promoter | Enhancer | Category | Sensitive? |
Chr5 | 1,295,228 | TERT | -66 | 1 | 0 | 1 | 0 | 0.008 | ELK1;ELF1;FLI1;ELK4;GABPA | TFAP2A | 1 | 0 | 2b | No |
Chr5 | 1,295,250 | TERT | -88 | 1 | 0 | 1 | 0 | 0 | ELK1;ELF1;FLI1;ELK4;GABPA | - | 1 | 0 | 4 | No |