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Table 2 Number of eQTL genes detected before and after filtering for biased reads estimated from single-end read simulations based on genome sequence and aligned with BWA

From: Allelic mapping bias in RNA-sequencing is not a major confounder in eQTL studies

 

Non-filtered data

eQTL genes

Genes without eQTL

Total

Filtered data

eQTL genes

3,253

70

3,323

Genes without eQTL

119

8,800

8,919

Total

3,372

8,870

12,242