DNA demethylases target promoter transposable elements to positively regulate stress responsive genes in Arabidopsis

Table 5 The large majority of commonly differentially expressed genes are downregulated in both rdd and the two RdDM mutants

	Total differentially expressed genes (≥2-fold) (n)		Commonly differentially expressed genes (n)
	Up	Down	Up	Down
rdd	69	279 (80.2%)^a	7	126 (94.7%)^b
nrpd1	556	843 (60.2%)	12	121 (91.0%)
nrpe1	465	705 (60.2%)	11	122 (91.7%)

^aPercentage against total differentially expressed genes in each of the mutants.
^bPercentage against the 133 commonly differentially expressed genes.

ISSN: 1474-760X