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Table 1 The numbers of samples in distinct FANTOM5 categories

From: A simple metric of promoter architecture robustly predicts expression breadth of human genes suggesting that most transcription factors are positive regulators

 

Human

Mouse

The total

952

396

Tissues

179

280

Primary cells

513

116

Cancer cell lines*

260

-

Brain tissuesa

60

51

Reproductive tissuesb

14

21

  1. NOTE: The first release of FANTOM5 included 952 human and 396 mouse tissues, primary cells and cancer cell-lines. FANTOM5 explored the entire genome space in an unbiased and systematic fashion, without arbitrarily pre-selected features of the microarray chip. All FANTOM5 libraries passed strict quality control tests.
  2. a, b brain tissues and reproductive tissues are subsets of the tissue set.
  3. * cancer cell lines are only available for human.