Skip to main content

Table 2 Overlaps between SoxNeuro core intervals and known cis -regulatory modules

From: SoxNeuro orchestrates central nervous system specification and differentiation in Drosophila and is only partially redundant with Dichaete

 

CRMs

CRMs overlapping with SoxN core intervals

Genes

Genes overlapping with SoxN core intervals

Genes in SoxN core

REDfly

1,864

492 (26.4%)

500

135 (27.0%)

218 (43.6%)

FlyLight

7,113

1,023 (14.4%)

970

342 (35.3%)

364 (37.5%)

FlyLight CNS

4,724

704 (14.9%)

780

267 (34.2%)

307 (39.4%)

All (REDfly + FlyLight)

8,959

1,511 (16.9%)

1,302

418 (32.1%)

477 (36.6%)

  1. Number and percentages of CRMs and associated genes from REDfly and/or FlyLight displaying overlap with SoxNeuro core intervals. 'FlyLight CNS' refers to FlyLight CRMs reportedly driving expression in the CNS. 'All' refers to the total number of unique CRMs in the REDfly and FlyLight sets combined together.
Back to article page

Genome Biology

ISSN: 1474-760X

Contact us