Table 3 Details of the 10 most heritable probes that do not contain any annotated SNPs
From: Contribution of genetic variation to transgenerational inheritance of DNA methylation
Probe ID | Chr | CpG position | h2 | Genomic context | Type | HIL | #CpG | GWAS SNP | SNP position | Pvalue |
|---|---|---|---|---|---|---|---|---|---|---|
cg15671450 | 6 | 29895116 | 0.934 | Upstream (HCG4B) | II | HC | 1 | rs111482415 | 29923140 | 4.8 × 10-78 |
cg01903420 | 13 | 27295928 | 0.933 | Intergenic | II | IC | 2 | rs1374010 | 27295317 | 3.0 × 10-105 |
cg03168497 | 17 | 48586147 | 0.932 | Intronic (MYCBPAP) | II | HC | 4 | rs73351675 | 48585554 | 8.1 × 10-84 |
cg11064039 | 7 | 766100 | 0.932 | Intronic (PRKAR1B) | I | HC | 3 | rs11763218 | 852281 | 8.8 × 10-58 |
cg24372256 | 21 | 43528868 | 0.931 | Intronic (UMODL1) | II | IC | 1 | rs34212454 | 43529216 | 2.9 × 10-101 |
cg26764761 | 16 | 87682142 | 0.927 | Intronic (JPH2) | I | IC | 7 | rs748554 | 87682775 | 1.4 × 10-107 |
cg16761754 | 14 | 105127242 | 0.927 | Intergeneic | I | IC | 3 | rs4075355 | 105125512 | 1.8 × 10-77 |
cg21358336 | 17 | 6558440 | 0.927 | Upstream (MIR4520B)/Downstream (MIR4520A) | II | ICshore | 1 | rs2040847 | 6558011 | 1.3 × 10-91 |
cg04118610 | 4 | 62707027 | 0.926 | Intronic (LPHN3) | II | LC | 2 | rs10021525 | 62707476 | 2.1 × 10-105 |
cg08164151 | 12 | 131118432 | 0.925 | Intergeneic | II | IC | 3 | rs10848167 | 131123623 | 2.9 × 10-101 |